Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 Y_RNA.292-201ENST00000364904 97 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 UBBP2-201ENST00000376781 231 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 SNORD20-201ENST00000384550 80 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 RNU6-394P-201ENST00000410735 107 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 EIF4HP2-201ENST00000424380 563 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AC079354.2-201ENST00000453523 154 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AURKAPS2-201ENST00000454983 333 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AC034236.1-201ENST00000469891 373 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AC023424.1-201ENST00000496058 459 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 RNU6-612P-201ENST00000516909 102 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 MIR4659A-201ENST00000580269 81 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AL162424.1-201ENST00000602325 221 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AL078605.1-201ENST00000603529 500 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 MIR6853-201ENST00000619642 74 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 U6.106-201ENST00000636360 105 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 AC010266.2-201ENST00000564741 3255 ntBASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SH3RF1Q7Z6J0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 RNA5SP388-201ENST00000362584 119 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 RNY4P28-201ENST00000365281 93 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 RNU6-47P-201ENST00000383866 107 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 AL357515.1-201ENST00000402967 542 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 RPL7P47-201ENST00000497299 556 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 MIR4512-201ENST00000583257 77 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 AC011921.3-201ENST00000605540 361 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 AL590240.4-201ENST00000616908 390 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 NCAPGP1-201ENST00000505112 1814 ntBASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SH3RF1Q7Z6J0 AC090740.1-201ENST00000623193 2262 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 AL590240.1-201ENST00000334118 313 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 MIR412-201ENST00000362142 91 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 U3.6-201ENST00000363622 211 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 RNU6-215P-201ENST00000365169 102 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 SNORA70F-201ENST00000384142 135 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 RNU6-102P-201ENST00000384485 104 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 RNU6-882P-201ENST00000391025 103 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 RN7SKP51-201ENST00000410781 304 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 BMS1P22-201ENST00000414726 313 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 AC140479.3-201ENST00000418944 1126 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 RPL21P40-201ENST00000428586 483 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 RPL23AP81-201ENST00000455252 467 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 AC020890.1-201ENST00000491837 504 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 Y_RNA.679-201ENST00000516416 91 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 RNU6-1012P-201ENST00000516606 109 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 SNORA31.18-201ENST00000517043 134 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 SNORA31.22-201ENST00000517204 135 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 AC103996.1-201ENST00000555468 102 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 MIR3160-1-201ENST00000577972 85 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 MIR4716-201ENST00000579628 84 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 MIR4472-2-201ENST00000582069 67 ntBASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SH3RF1Q7Z6J0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms