Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC233279.1-201ENST00000455300 423 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 RBM43P1-201ENST00000476891 1081 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC026801.1-201ENST00000497178 464 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 SNORD19.2-201ENST00000516978 73 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 RNU6-1003P-201ENST00000517099 105 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC006199.1-201ENST00000548728 219 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC007954.1-201ENST00000554198 494 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 GTF3AP2-201ENST00000557014 266 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 MIR4658-201ENST00000584344 65 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 ELOCP29-201ENST00000588193 334 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AP000811.1-201ENST00000603803 651 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC025588.2-201ENST00000604851 466 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AL391813.2-201ENST00000609113 322 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 SCARNA15.3-201ENST00000626315 122 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 SCARNA4.1-201ENST00000628597 123 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 ASNSP3-201ENST00000451989 1306 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 SNORA5B-201ENST00000363786 132 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 MIR9-1-201ENST00000385198 89 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 RPS20P2-201ENST00000402520 389 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AL161651.1-201ENST00000440882 223 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 COX6CP12-201ENST00000446748 202 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 ST13P20-201ENST00000447996 1065 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC090525.1-201ENST00000479116 478 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 RNU6-143P-201ENST00000516942 93 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC109329.2-201ENST00000519658 482 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC123904.2-201ENST00000548059 300 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC135628.1-201ENST00000568867 534 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 MIR3199-1-201ENST00000582434 88 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 MIR5194-201ENST00000582634 120 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC073544.2-201ENST00000601155 540 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC018714.1-201ENST00000605028 208 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC069234.5-201ENST00000611056 416 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 HMGB1P24-202ENST00000615653 685 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 AC009159.1-201ENST00000618386 642 ntBASIC2.73□□□□□ -1.97
HLA-DPA1P20036 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DPA1P20036 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 OR5J1P-201ENST00000313544 939 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 RNU6-288P-201ENST00000363690 104 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 MIR218-1-201ENST00000384999 110 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 RNU6-220P-201ENST00000390919 107 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 RPS24P7-201ENST00000416921 246 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 RPL22P18-201ENST00000417197 377 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AL592045.1-201ENST00000429867 352 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 RPL37P21-201ENST00000435890 276 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 SNORD97-201ENST00000459187 142 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 RPL39P36-201ENST00000490784 156 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AL121821.2-201ENST00000556081 394 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC009163.5-201ENST00000575421 637 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AP001981.2-201ENST00000603241 418 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 BNIP3P9-201ENST00000603714 553 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AL670379.6-201ENST00000603753 252 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AL670379.11-201ENST00000604059 253 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC008162.1-201ENST00000604718 254 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AC007363.1-201ENST00000604736 620 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AL670379.1-201ENST00000604752 252 ntBASIC2.72□□□□□ -1.97
HLA-DPA1P20036 AL670379.5-201ENST00000605253 252 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms