Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXA2O43364 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA2O43364 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA2O43364 AL591926.8-201ENST00000616876 211 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 SCARNA4-202ENST00000625402 129 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 IGHVIII-44-202ENST00000636235 289 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
HOXA2O43364 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA2O43364 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA2O43364 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA2O43364 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA2O43364 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA2O43364 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HOXA2O43364 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HOXA2O43364 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA2O43364 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA2O43364 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA2O43364 RN7SKP113-201ENST00000363891 295 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 Y_RNA.441-201ENST00000384123 112 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 RNU6-959P-201ENST00000384671 107 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 RAB9AP3-201ENST00000412737 573 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA2O43364 Z85995.1-201ENST00000415547 335 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA2O43364 AC245028.1-201ENST00000423259 256 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.57□□□□□ -1.52
HOXA2O43364 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA2O43364 RAB9AP1-201ENST00000449393 573 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA2O43364 ANP32BP2-201ENST00000454525 545 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 SNORD2.1-201ENST00000458762 69 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 AP000870.1-201ENST00000472927 406 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 AC074133.1-201ENST00000515696 183 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA2O43364 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.57□□□□□ -1.52
HOXA2O43364 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA2O43364 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXA2O43364 MIR7853-201ENST00000584820 132 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA2O43364 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 AC099506.2-201ENST00000623074 221 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 AP001273.1-201ENST00000624493 3152 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA2O43364 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA2O43364 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA2O43364 RBBP8P1-201ENST00000449447 1844 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA2O43364 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
HOXA2O43364 SDAD1P1-202ENST00000524156 2051 ntBASIC5.57□□□□□ -1.52
HOXA2O43364 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA2O43364 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA2O43364 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA2O43364 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA2O43364 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA2O43364 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HOXA2O43364 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
HOXA2O43364 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA2O43364 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HOXA2O43364 RNA5SP428-201ENST00000365129 132 ntBASIC5.56□□□□□ -1.52
HOXA2O43364 RN7SL591P-201ENST00000496150 292 ntBASIC5.56□□□□□ -1.52
HOXA2O43364 RNU6-1256P-201ENST00000516539 103 ntBASIC5.56□□□□□ -1.52
HOXA2O43364 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXA2O43364 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXA2O43364 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA2O43364 MIR4330-201ENST00000579077 105 ntBASIC5.56□□□□□ -1.52
HOXA2O43364 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA2O43364 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXA2O43364 AC091895.1-201ENST00000624494 256 ntBASIC5.56□□□□□ -1.52
HOXA2O43364 MIR6715B-201ENST00000637172 77 ntBASIC5.56□□□□□ -1.52
HOXA2O43364 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA2O43364 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA2O43364 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA2O43364 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HOXA2O43364 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA2O43364 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXA2O43364 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HOXA2O43364 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HOXA2O43364 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXA2O43364 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXA2O43364 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXA2O43364 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXA2O43364 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HOXA2O43364 RNA5SP361-201ENST00000362686 118 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 RNU6-105P-201ENST00000363909 104 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 RNU6-1286P-201ENST00000383871 107 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 SNORD116-18-201ENST00000383961 92 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXA2O43364 EIF1AXP1-201ENST00000419267 435 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXA2O43364 POLR2KP2-201ENST00000438155 177 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXA2O43364 AL354714.3-201ENST00000447284 493 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 NUTF2P7-201ENST00000453086 375 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 snoU109.2-201ENST00000459316 135 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXA2O43364 RNY3P16-201ENST00000516338 101 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 RN7SKP49-201ENST00000516675 260 ntBASIC5.55□□□□□ -1.52
HOXA2O43364 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXA2O43364 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms