Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 HMGN1P11-201ENST00000508668 303 ntBASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 RNU6-182P-201ENST00000516970 105 ntBASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 AF186190.1-201ENST00000517470 480 ntBASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 RRN3P3-201ENST00000549207 578 ntBASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 RN7SL176P-201ENST00000580352 264 ntBASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 AC002545.1-201ENST00000592511 181 ntBASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 AL355877.2-201ENST00000603670 358 ntBASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 MAPK10-304ENST00000641341 3984 ntBASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SALL4Q9UJQ4 AL136164.3-201ENST00000624429 3978 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 Y_RNA.183-201ENST00000363882 113 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 RNU6-200P-201ENST00000364743 107 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 RNU6-611P-201ENST00000384276 104 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 U3.42-201ENST00000408746 214 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AC016397.1-201ENST00000412463 242 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 EI24P1-201ENST00000416584 867 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 EIF4EP2-201ENST00000422816 654 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 RPS5P7-201ENST00000456664 608 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 LINC01399-202ENST00000458450 244 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 IGLV2-34-201ENST00000490007 283 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AC110792.1-201ENST00000491826 472 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AC004852.3-201ENST00000614131 326 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AL353748.2-201ENST00000622148 471 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 MIR7641-1-201ENST00000627518 61 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AL365440.1-201ENST00000436135 2167 ntBASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SALL4Q9UJQ4 AL592437.2-201ENST00000421655 2434 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 Y_RNA.518-201ENST00000384552 113 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 RPS16P5-201ENST00000406501 404 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 MIR548M-201ENST00000408260 86 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 MIR548H3-201ENST00000408771 118 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AL590135.1-201ENST00000422215 156 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC092573.2-201ENST00000434546 243 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 IFNWP4-201ENST00000453148 294 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 ISCUP1-201ENST00000454451 448 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 RPL36AP41-201ENST00000493820 306 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 GZMAP1-201ENST00000503054 631 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 RNA5SP471-201ENST00000516971 106 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 RNU4-60P-201ENST00000517239 135 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC109329.1-201ENST00000518744 317 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC091144.1-201ENST00000519573 138 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC034114.1-201ENST00000520293 285 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AL137100.2-201ENST00000555786 315 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC022968.1-201ENST00000567372 442 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 MIR4458-201ENST00000578872 75 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 MIR5701-3-201ENST00000578890 82 ntBASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.88□□□□□ -1.63
SALL4Q9UJQ4 MIR5701-1-201ENST00000585138 82 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms