Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL356968.1-201ENST00000416622 474 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 ISCA1P1-201ENST00000426679 387 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 RPL23AP16-201ENST00000441715 421 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 TXNP1-201ENST00000441872 371 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 HMGN2P32-201ENST00000444648 269 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 IFNA11P-201ENST00000446352 526 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 RBMY2UP-201ENST00000453474 324 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 RPL31P3-201ENST00000458430 332 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 RN7SL432P-201ENST00000484057 298 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 MED28P6-201ENST00000558776 231 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 SNORA74C-1-201ENST00000580726 201 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AL022401.1-201ENST00000619498 108 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 RNU6-428P-201ENST00000362942 107 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 RNU1-115P-201ENST00000365329 160 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.342-201ENST00000365352 113 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.480-201ENST00000384364 102 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 RNU6-630P-201ENST00000391258 106 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 EIF1P3-201ENST00000423841 334 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AC008264.1-201ENST00000447612 367 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 SSXP4-201ENST00000451349 245 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AC083904.1-201ENST00000487828 231 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 RN7SKP43-201ENST00000516173 320 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.704-201ENST00000516851 102 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AC024405.2-202ENST00000532731 184 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AL392112.1-201ENST00000605115 829 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 AL390240.1-201ENST00000612950 384 ntBASIC1.33□□□□□ -2.2
HMCN1Q96RW7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMCN1Q96RW7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 LCOR-201ENST00000286067 4542 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.176-201ENST00000363815 109 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU6-290P-201ENST00000365212 101 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU6-438P-201ENST00000365561 103 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.507-201ENST00000384500 99 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU6-328P-201ENST00000390887 106 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MIR190B-201ENST00000401119 79 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AL512504.1-201ENST00000415494 778 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AIMP1P2-201ENST00000425294 312 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 YWHAEP5-201ENST00000431545 765 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RPL23AP22-201ENST00000437556 453 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC090515.1-201ENST00000465295 476 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC107015.1-201ENST00000466902 747 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC074198.2-201ENST00000508153 258 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNA5SP227-201ENST00000516184 113 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.683-201ENST00000516508 93 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 SNORD35B-201ENST00000363660 87 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.264-201ENST00000364665 102 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.437-201ENST00000384113 113 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.443-201ENST00000384135 111 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 SNORA40.18-201ENST00000391200 128 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 SNORD58.1-201ENST00000391313 66 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RPS4XP7-201ENST00000406274 780 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms