Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-1286P-201ENST00000383871 107 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 Y_RNA.541-201ENST00000384640 113 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AL391361.1-201ENST00000405580 489 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 Z82188.1-201ENST00000436709 154 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AC009296.1-201ENST00000443146 155 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 TOMM22P6-201ENST00000465035 409 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 RPS26P21-201ENST00000475397 348 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-615P-201ENST00000516065 106 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AC016256.1-201ENST00000547971 354 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 MIR4659A-201ENST00000580269 81 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 MIR1273E-201ENST00000581165 102 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AC010928.2-201ENST00000588017 287 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 AL356157.2-201ENST00000605122 111 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 HSPA8P1-201ENST00000425843 1833 ntBASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.02□□□□□ -1.61
DEPDC4Q8N2C3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AC083843.3-201ENST00000623679 2186 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AL159987.1-201ENST00000347911 293 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 Y_RNA.54-201ENST00000362766 105 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-527P-201ENST00000363425 104 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 Y_RNA.270-201ENST00000364693 104 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 RNA5SP30-201ENST00000365552 115 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 MIR518D-201ENST00000385014 87 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 RPS17P15-201ENST00000475609 349 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 RPL32P33-201ENST00000487023 394 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AC078817.1-201ENST00000492623 435 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 RPL23AP49-201ENST00000492925 468 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AC078918.1-201ENST00000498515 228 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-496P-201ENST00000516145 99 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 SNORA43.3-201ENST00000517240 103 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 IGLV2-28-201ENST00000520681 304 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 IGKV2-18-201ENST00000522607 343 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AC090281.1-201ENST00000523019 276 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AL512605.2-201ENST00000592972 256 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 FO393422.1-201ENST00000603908 708 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 U2.14-201ENST00000615943 113 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AP005431.1-201ENST00000618479 319 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 U2.21-201ENST00000637295 81 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 AC241585.2-209ENST00000638217 143 ntBASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DEPDC4Q8N2C3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 Y_RNA.277-201ENST00000364754 102 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 Z98749.2-208ENST00000381646 500 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-217P-201ENST00000384164 104 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 RNU6-1197P-201ENST00000391183 107 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 RNU1-139P-201ENST00000391307 165 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 RPL26P27-201ENST00000414397 437 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 AC093655.2-201ENST00000425735 631 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 CYCSP32-201ENST00000440548 321 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 UBE2CP3-201ENST00000502715 450 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 IGHVII-53-1-201ENST00000519538 255 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 MIR3936-201ENST00000584304 110 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 FTX_3.1-201ENST00000610451 147 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 AC097372.5-201ENST00000623665 376 ntBASIC5□□□□□ -1.61
DEPDC4Q8N2C3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
DEPDC4Q8N2C3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 AL353743.1-202ENST00000431724 1695 ntBASIC4.99□□□□□ -1.61
DEPDC4Q8N2C3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms