Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 AC069307.1-201ENST00000602820 447 ntBASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 AL138963.2-201ENST00000605137 226 ntBASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 AL139124.1-201ENST00000609123 421 ntBASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 U73479.1-201ENST00000618062 168 ntBASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 AC048347.1-201ENST00000624621 427 ntBASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.25□□□□□ -1.73
SSBP4Q9BWG4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 CUL1P1-201ENST00000509510 2425 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RNU6-527P-201ENST00000363425 104 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RNU6-103P-201ENST00000363686 107 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RNU6-105P-201ENST00000363909 104 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RNA5SP77-201ENST00000365394 120 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 MIR431-201ENST00000385266 114 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RNU6-159P-201ENST00000391080 106 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RNU6-381P-201ENST00000391259 108 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 SNORA40C-201ENST00000391285 128 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RNA5SP44-201ENST00000410446 133 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 NDUFB4P8-201ENST00000435351 367 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 FABP5P15-201ENST00000453566 214 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 snoU109.2-201ENST00000459316 135 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RN7SL267P-201ENST00000485107 261 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 AL049874.1-201ENST00000489560 388 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 FCF1P8-201ENST00000510322 597 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RNU5E-3P-201ENST00000515913 68 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 IGLV3-24-201ENST00000517477 197 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 RN7SL290P-201ENST00000578661 300 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 SMIM12P1-201ENST00000603004 274 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 AL590392.1-201ENST00000604960 446 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 AC092628.2-201ENST00000622492 339 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 AC111152.1-202ENST00000635848 339 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 AC006206.1-201ENST00000544842 3387 ntBASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SSBP4Q9BWG4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 LINC01613-201ENST00000561476 2780 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 RNU1-134P-201ENST00000362935 165 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 RNA5SP326-201ENST00000363209 110 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 RNU6-147P-201ENST00000383983 107 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 Y_RNA.595-201ENST00000410403 105 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 RNA5SP231-201ENST00000410496 138 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 RPL35AP3-201ENST00000414680 288 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 AC023141.8-201ENST00000442554 208 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 RPL31P13-201ENST00000484151 370 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 RPL12P30-201ENST00000488389 499 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 AC015524.1-201ENST00000491585 472 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 RNU6-1198P-201ENST00000516904 67 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 AC100767.1-201ENST00000528178 123 ntBASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.23□□□□□ -1.73
SSBP4Q9BWG4 AC090877.1-201ENST00000561418 344 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms