Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC092757.1-201ENST00000467293 467 ntBASIC1.1□□□□□ -2.23
ABCA1O95477 SNORA48.10-201ENST00000516965 160 ntBASIC1.1□□□□□ -2.23
ABCA1O95477 AC118942.1-201ENST00000529674 1035 ntBASIC1.1□□□□□ -2.23
ABCA1O95477 AC073413.2-201ENST00000604332 360 ntBASIC1.1□□□□□ -2.23
ABCA1O95477 AC079791.1-201ENST00000605356 973 ntBASIC1.1□□□□□ -2.23
ABCA1O95477 AL356585.4-201ENST00000623078 1229 ntBASIC1.1□□□□□ -2.23
ABCA1O95477 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
ABCA1O95477 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
ABCA1O95477 RNU6-1083P-201ENST00000384022 107 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 AL030996.1-201ENST00000411430 235 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.09□□□□□ -2.23
ABCA1O95477 AC074117.2-201ENST00000417130 397 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.09□□□□□ -2.23
ABCA1O95477 HMGN1P33-201ENST00000432945 451 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.09□□□□□ -2.23
ABCA1O95477 AL359385.1-201ENST00000456509 365 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 AC015908.1-201ENST00000478739 476 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 KLRA1P-201ENST00000503499 986 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 AC022447.3-201ENST00000506865 495 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.09□□□□□ -2.23
ABCA1O95477 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.09□□□□□ -2.23
ABCA1O95477 AP000907.2-201ENST00000530827 353 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 CYP3A137P-201ENST00000562436 69 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.09□□□□□ -2.23
ABCA1O95477 AC011712.1-201ENST00000588959 234 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 AC078899.2-201ENST00000595282 212 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 SDR42E1P2-201ENST00000614861 481 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 SDR42E1P4-201ENST00000620894 481 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
ABCA1O95477 AC103710.2-202ENST00000641454 2853 ntBASIC1.09□□□□□ -2.23
ABCA1O95477 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.09□□□□□ -2.23
ABCA1O95477 AC011477.1-204ENST00000623416 1325 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 RNU6-444P-201ENST00000383988 108 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.09□□□□□ -2.24
ABCA1O95477 AL365400.1-201ENST00000431854 640 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.24
ABCA1O95477 OR6K5P-201ENST00000447050 945 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 ATG12P2-201ENST00000456830 416 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.09□□□□□ -2.24
ABCA1O95477 RPS15AP34-201ENST00000487776 387 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 RPS27P26-201ENST00000494583 239 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 SUMO1P1-201ENST00000497904 306 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 AC105252.1-201ENST00000503089 286 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.09□□□□□ -2.24
ABCA1O95477 RNU6-488P-201ENST00000515918 99 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 SCARNA3-201ENST00000517097 143 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.09□□□□□ -2.24
ABCA1O95477 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.09□□□□□ -2.24
ABCA1O95477 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.09□□□□□ -2.24
ABCA1O95477 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 AC107214.2-201ENST00000608204 634 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 AC009318.4-201ENST00000620496 486 ntBASIC1.09□□□□□ -2.24
ABCA1O95477 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.09□□□□□ -2.24
ABCA1O95477 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.09□□□□□ -2.24
ABCA1O95477 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.09□□□□□ -2.24
ABCA1O95477 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
ABCA1O95477 RNU6-37P-201ENST00000362692 107 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 RNU6-11P-201ENST00000364234 107 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.08□□□□□ -2.24
ABCA1O95477 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA1O95477 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.08□□□□□ -2.24
ABCA1O95477 AL445669.1-201ENST00000426743 755 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 BMI1P1-201ENST00000445879 941 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 SNRPGP6-201ENST00000451124 220 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.08□□□□□ -2.24
ABCA1O95477 AC104164.3-201ENST00000467363 1258 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AC104108.1-201ENST00000509930 412 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 CASP1P1-201ENST00000526345 212 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA1O95477 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA1O95477 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA1O95477 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.08□□□□□ -2.24
ABCA1O95477 CBX3P2-202ENST00000583365 535 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AC079597.1-201ENST00000624306 508 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.08□□□□□ -2.24
ABCA1O95477 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ABCA1O95477 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
ABCA1O95477 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
ABCA1O95477 Z85995.1-201ENST00000415547 335 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 HMGB1P49-201ENST00000418882 569 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 TAAR7P-201ENST00000436141 242 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AC015724.1-201ENST00000478577 156 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 SUMO2P6-201ENST00000505273 288 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.08□□□□□ -2.24
ABCA1O95477 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 MIR3660-201ENST00000584845 100 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AL109918.3-201ENST00000603072 338 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AC097468.3-201ENST00000607956 456 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 AC009950.2-201ENST00000636548 183 ntBASIC1.08□□□□□ -2.24
ABCA1O95477 SNORA38-201ENST00000363946 132 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 RNU4-41P-201ENST00000364426 143 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 AL355497.1-201ENST00000406262 551 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 RNU6-564P-201ENST00000410983 104 ntBASIC1.07□□□□□ -2.24
ABCA1O95477 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA1O95477 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.07□□□□□ -2.24
ABCA1O95477 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms