Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 Y_RNA.446-201ENST00000384178 104 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 RNU6-21P-201ENST00000384710 107 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 SNORA46.1-201ENST00000391069 153 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 RNU5A-5P-201ENST00000411054 116 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 RPL30P13-201ENST00000418873 348 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 AC024067.1-201ENST00000426199 223 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 RNU6-953P-201ENST00000459154 107 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 AC010683.1-201ENST00000473673 378 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 RPS27AP9-201ENST00000477681 438 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 RNU6-27P-201ENST00000516146 107 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 AC092470.1-201ENST00000546187 132 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 AK6P2-201ENST00000549020 471 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 MIR4423-201ENST00000580922 80 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 CR392039.5-201ENST00000623201 510 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 SCARNA15.3-201ENST00000626315 122 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 SCARNA4.1-201ENST00000628597 123 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 BTBD10P1-201ENST00000549824 1352 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 A2MP1-204ENST00000566278 4130 ntBASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL25A1Q9BXS0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 RNA5SP432-201ENST00000362480 116 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 Y_RNA.75-201ENST00000362927 97 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 Y_RNA.136-201ENST00000363444 102 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 SNORD51-201ENST00000384320 80 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 RNU6-817P-201ENST00000391083 104 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 RPL23AP17-201ENST00000401064 499 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 RNU6-1064P-201ENST00000410626 104 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC011742.1-201ENST00000431448 434 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 HIGD1AP2-201ENST00000446367 280 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC146944.2-203ENST00000502493 354 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 HMGN1P11-201ENST00000508668 303 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC110768.1-201ENST00000509222 400 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC139495.1-202ENST00000513164 354 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 RNU7-175P-201ENST00000515915 61 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 RNU6-659P-201ENST00000516454 104 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 Y_RNA.709-201ENST00000516952 92 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AP003730.1-201ENST00000524605 285 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 SNRPGP16-201ENST00000533275 226 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC040958.1-201ENST00000561102 201 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 MIR548AC-201ENST00000585049 88 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC025588.3-201ENST00000604182 274 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC005828.6-201ENST00000606610 232 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC004852.3-201ENST00000614131 326 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC012314.7-201ENST00000619693 93 ntBASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.1□□□□□ -1.59
COL25A1Q9BXS0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AC135776.4-201ENST00000624300 1904 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 U3.6-201ENST00000363622 211 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 Y_RNA.238-201ENST00000364441 102 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 RNU4-56P-201ENST00000364700 142 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 RNU6-926P-201ENST00000384075 107 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms