Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
DDX1Q92499 AC104136.1-201ENST00000512969 394 ntBASIC4.57□□□□□ -1.68
DDX1Q92499 RNU6-764P-201ENST00000516396 105 ntBASIC4.57□□□□□ -1.68
DDX1Q92499 RNU1-45P-201ENST00000517191 141 ntBASIC4.57□□□□□ -1.68
DDX1Q92499 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.57□□□□□ -1.68
DDX1Q92499 RPL23AP84-201ENST00000571193 464 ntBASIC4.57□□□□□ -1.68
DDX1Q92499 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.57□□□□□ -1.68
DDX1Q92499 AC073539.2-201ENST00000597113 165 ntBASIC4.57□□□□□ -1.68
DDX1Q92499 HMGB1P24-202ENST00000615653 685 ntBASIC4.57□□□□□ -1.68
DDX1Q92499 AC007998.5-201ENST00000622938 237 ntBASIC4.57□□□□□ -1.68
DDX1Q92499 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
DDX1Q92499 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.57□□□□□ -1.68
DDX1Q92499 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
DDX1Q92499 AL161912.2-201ENST00000565707 3007 ntBASIC4.57□□□□□ -1.68
DDX1Q92499 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DDX1Q92499 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
DDX1Q92499 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
DDX1Q92499 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
DDX1Q92499 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX1Q92499 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.57□□□□□ -1.68
DDX1Q92499 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
DDX1Q92499 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX1Q92499 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX1Q92499 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX1Q92499 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX1Q92499 RNU6-1115P-201ENST00000362490 106 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 RNU4-66P-201ENST00000365199 138 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
DDX1Q92499 SNORA24.1-201ENST00000384401 135 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 MIR483-201ENST00000385070 76 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 AL139397.2-201ENST00000404529 772 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 MIR548I3-201ENST00000408378 149 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 RNU6ATAC-201ENST00000408749 126 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 MIR548I1-201ENST00000408810 149 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.56□□□□□ -1.68
DDX1Q92499 RNU6-387P-201ENST00000411331 105 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 BX323014.1-201ENST00000412876 237 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 RPL37P10-201ENST00000412884 288 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 MCFD2P1-201ENST00000417812 300 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 EIF4EP1-201ENST00000422311 642 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 RBMY1KP-201ENST00000423480 476 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 AC093106.2-201ENST00000428212 385 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX1Q92499 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX1Q92499 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX1Q92499 RPL26P6-201ENST00000440913 438 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX1Q92499 SUMO1P2-201ENST00000452524 304 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.56□□□□□ -1.68
DDX1Q92499 AC110792.1-201ENST00000491826 472 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 HMGB1P22-201ENST00000505315 124 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 RNU6-976P-201ENST00000516086 111 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 RNU6-566P-201ENST00000516790 107 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 IGKV2D-23-201ENST00000518179 286 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX1Q92499 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX1Q92499 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX1Q92499 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX1Q92499 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX1Q92499 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.56□□□□□ -1.68
DDX1Q92499 AC005255.1-201ENST00000593748 216 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 MIR432-201ENST00000606207 94 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 AC083806.3-201ENST00000614016 455 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 AL360181.4-201ENST00000621752 134 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 AC140479.6-201ENST00000633535 357 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DDX1Q92499 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
DDX1Q92499 AC121333.1-201ENST00000567488 2709 ntBASIC4.56□□□□□ -1.68
DDX1Q92499 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
DDX1Q92499 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.56□□□□□ -1.68
DDX1Q92499 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DDX1Q92499 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DDX1Q92499 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX1Q92499 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
DDX1Q92499 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
DDX1Q92499 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.55□□□□□ -1.68
DDX1Q92499 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
DDX1Q92499 RNU5A-1-201ENST00000362698 116 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 RNU6-379P-201ENST00000363813 104 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 SET-203ENST00000372688 801 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX1Q92499 DEFB109C-201ENST00000382575 264 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 DEFB109B-201ENST00000382656 264 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 RNU6-946P-201ENST00000383878 107 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 RNU6-1029P-201ENST00000384109 107 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 RNU2-3P-201ENST00000410144 191 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX1Q92499 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX1Q92499 RPL7P2-201ENST00000427639 268 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX1Q92499 AL160004.2-201ENST00000432935 350 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 AF228730.2-201ENST00000438784 848 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 RPL23AP81-201ENST00000455252 467 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX1Q92499 snoU13.4-201ENST00000458916 104 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 Y_RNA.653-201ENST00000459091 95 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 RPL5P30-201ENST00000465511 891 ntBASIC4.55□□□□□ -1.68
DDX1Q92499 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.55□□□□□ -1.68
DDX1Q92499 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX1Q92499 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.55□□□□□ -1.68
DDX1Q92499 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms