Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN2P57739 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
CLDN2P57739 RNU6-1256P-201ENST00000516539 103 ntBASIC3.34□□□□□ -1.87
CLDN2P57739 OR5BN1P-201ENST00000532955 829 ntBASIC3.34□□□□□ -1.87
CLDN2P57739 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN2P57739 HMGB1P33-201ENST00000563485 527 ntBASIC3.34□□□□□ -1.87
CLDN2P57739 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN2P57739 MIR5680-201ENST00000577577 84 ntBASIC3.34□□□□□ -1.87
CLDN2P57739 AC012493.2-201ENST00000595083 291 ntBASIC3.34□□□□□ -1.87
CLDN2P57739 AC104763.2-201ENST00000604179 382 ntBASIC3.34□□□□□ -1.87
CLDN2P57739 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN2P57739 AL365204.3-201ENST00000612448 685 ntBASIC3.34□□□□□ -1.87
CLDN2P57739 MIR8057-201ENST00000620957 69 ntBASIC3.34□□□□□ -1.87
CLDN2P57739 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN2P57739 AC002546.1-201ENST00000588041 2504 ntBASIC3.34□□□□□ -1.88
CLDN2P57739 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
CLDN2P57739 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLDN2P57739 ZNF680P1-201ENST00000436625 1469 ntBASIC3.34□□□□□ -1.88
CLDN2P57739 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLDN2P57739 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
CLDN2P57739 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CLDN2P57739 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CLDN2P57739 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN2P57739 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN2P57739 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN2P57739 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN2P57739 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN2P57739 Y_RNA.9-201ENST00000362354 101 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 Y_RNA.372-201ENST00000365599 102 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN2P57739 RNU6-946P-201ENST00000383878 107 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 MIR493-201ENST00000385254 89 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 AL357075.1-201ENST00000404107 726 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 CIR1P3-201ENST00000405137 479 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 AL590002.1-201ENST00000406554 418 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN2P57739 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN2P57739 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN2P57739 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN2P57739 AC002075.2-201ENST00000425207 252 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 HMGB1P27-201ENST00000431429 603 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 UBE2V1P8-201ENST00000437166 265 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 MTATP6P13-201ENST00000438531 667 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN2P57739 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN2P57739 AC027673.1-201ENST00000456245 405 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 AL356010.1-201ENST00000456364 102 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 RNU6-953P-201ENST00000459154 107 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.33□□□□□ -1.88
CLDN2P57739 ARL4AP2-201ENST00000507378 601 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 PHBP14-201ENST00000512887 367 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN2P57739 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN2P57739 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLDN2P57739 AC004024.1-201ENST00000549244 247 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 AC005476.1-201ENST00000554427 397 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN2P57739 AC008536.2-201ENST00000607284 349 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 AC090517.2-201ENST00000614966 680 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 uc_338.32-201ENST00000615087 172 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN2P57739 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN2P57739 AC008725.1-201ENST00000605123 2263 ntBASIC3.33□□□□□ -1.88
CLDN2P57739 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN2P57739 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN2P57739 AC093908.1-201ENST00000623125 8092 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN2P57739 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN2P57739 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN2P57739 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLDN2P57739 RNU6-179P-201ENST00000363350 107 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 RNU6-1322P-201ENST00000364309 107 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 RNU6-741P-201ENST00000383889 107 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 U3.42-201ENST00000408746 214 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 RNU6-387P-201ENST00000411331 105 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 OR51A5P-201ENST00000415429 942 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 SDCBPP3-201ENST00000419629 891 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 YPEL5P1-201ENST00000419731 367 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AL353193.1-201ENST00000421444 268 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN2P57739 AC093106.2-201ENST00000428212 385 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 TAAR7P-201ENST00000436141 242 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 RPS15AP9-201ENST00000439856 381 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AC009237.8-201ENST00000445492 379 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 CBWD4P-201ENST00000445695 655 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN2P57739 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN2P57739 RNU7-182P-201ENST00000459009 62 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 MRPS17P3-201ENST00000465453 385 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 RPS23P3-201ENST00000470993 430 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 RPS29P2-201ENST00000479278 136 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN2P57739 AC011352.1-201ENST00000512300 793 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 APOOP4-201ENST00000513530 597 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 Y_RNA.693-201ENST00000516641 110 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN2P57739 MTND4LP26-201ENST00000518144 282 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN2P57739 AL157687.1-201ENST00000554853 619 ntBASIC3.32□□□□□ -1.88
CLDN2P57739 MIR4738-201ENST00000579134 87 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms