Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RNU2-43P-201ENST00000410306 190 ntBASIC4.26□□□□□ -1.73
GDNFP39905 RNA5SP146-201ENST00000410743 123 ntBASIC4.26□□□□□ -1.73
GDNFP39905 EIF4A1P3-201ENST00000411521 244 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AF186996.5-201ENST00000418098 904 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AC093655.2-201ENST00000425735 631 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AL451062.2-201ENST00000427515 271 ntBASIC4.26□□□□□ -1.73
GDNFP39905 MTND3P9-201ENST00000429526 346 ntBASIC4.26□□□□□ -1.73
GDNFP39905 MTCO3P29-201ENST00000432119 779 ntBASIC4.26□□□□□ -1.73
GDNFP39905 ELOCP18-201ENST00000434209 337 ntBASIC4.26□□□□□ -1.73
GDNFP39905 RNU7-120P-201ENST00000459334 63 ntBASIC4.26□□□□□ -1.73
GDNFP39905 RN7SL443P-201ENST00000464331 290 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AC009127.1-201ENST00000467090 155 ntBASIC4.26□□□□□ -1.73
GDNFP39905 COPS8P2-201ENST00000473228 627 ntBASIC4.26□□□□□ -1.73
GDNFP39905 RN7SL799P-201ENST00000475891 298 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.26□□□□□ -1.73
GDNFP39905 SUMO2P6-201ENST00000505273 288 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AC008716.1-201ENST00000511084 513 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.26□□□□□ -1.73
GDNFP39905 SERF1AP1-201ENST00000514575 187 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.26□□□□□ -1.73
GDNFP39905 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.26□□□□□ -1.73
GDNFP39905 AP002392.1-201ENST00000537692 208 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.26□□□□□ -1.73
GDNFP39905 MIR6886-201ENST00000619864 61 ntBASIC4.26□□□□□ -1.73
GDNFP39905 AC140113.4-201ENST00000622087 222 ntBASIC4.26□□□□□ -1.73
GDNFP39905 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.26□□□□□ -1.73
GDNFP39905 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.26□□□□□ -1.73
GDNFP39905 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.26□□□□□ -1.73
GDNFP39905 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
GDNFP39905 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.26□□□□□ -1.73
GDNFP39905 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
GDNFP39905 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
GDNFP39905 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.26□□□□□ -1.73
GDNFP39905 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GDNFP39905 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GDNFP39905 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
GDNFP39905 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
GDNFP39905 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GDNFP39905 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
GDNFP39905 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GDNFP39905 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GDNFP39905 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.25□□□□□ -1.73
GDNFP39905 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.25□□□□□ -1.73
GDNFP39905 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.25□□□□□ -1.73
GDNFP39905 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
GDNFP39905 RNU1-94P-201ENST00000362627 173 ntBASIC4.25□□□□□ -1.73
GDNFP39905 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
GDNFP39905 RNA5SP372-201ENST00000390836 115 ntBASIC4.25□□□□□ -1.73
GDNFP39905 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.25□□□□□ -1.73
GDNFP39905 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.25□□□□□ -1.73
GDNFP39905 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.25□□□□□ -1.73
GDNFP39905 RN7SL517P-201ENST00000462240 305 ntBASIC4.25□□□□□ -1.73
GDNFP39905 OR2AO1P-201ENST00000476497 403 ntBASIC4.25□□□□□ -1.73
GDNFP39905 RN7SL817P-201ENST00000480777 288 ntBASIC4.25□□□□□ -1.73
GDNFP39905 RN7SL214P-201ENST00000487317 265 ntBASIC4.25□□□□□ -1.73
GDNFP39905 RPS15AP34-201ENST00000487776 387 ntBASIC4.25□□□□□ -1.73
GDNFP39905 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.25□□□□□ -1.73
GDNFP39905 Y_RNA.683-201ENST00000516508 93 ntBASIC4.25□□□□□ -1.73
GDNFP39905 AC024405.2-202ENST00000532731 184 ntBASIC4.25□□□□□ -1.73
GDNFP39905 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
GDNFP39905 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.25□□□□□ -1.73
GDNFP39905 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.25□□□□□ -1.73
GDNFP39905 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.25□□□□□ -1.73
GDNFP39905 SYF2P1-201ENST00000550658 413 ntBASIC4.25□□□□□ -1.73
GDNFP39905 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.25□□□□□ -1.73
GDNFP39905 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.25□□□□□ -1.73
GDNFP39905 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.25□□□□□ -1.73
GDNFP39905 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.25□□□□□ -1.73
GDNFP39905 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.25□□□□□ -1.73
GDNFP39905 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.25□□□□□ -1.73
GDNFP39905 U6.92-201ENST00000636464 89 ntBASIC4.25□□□□□ -1.73
GDNFP39905 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
GDNFP39905 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.25□□□□□ -1.73
GDNFP39905 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GDNFP39905 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GDNFP39905 LINC02555-201ENST00000563933 1951 ntBASIC4.25□□□□□ -1.73
GDNFP39905 PABPC1P6-201ENST00000445594 1829 ntBASIC4.25□□□□□ -1.73
GDNFP39905 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
GDNFP39905 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
GDNFP39905 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.25□□□□□ -1.73
GDNFP39905 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.24□□□□□ -1.73
GDNFP39905 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GDNFP39905 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GDNFP39905 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GDNFP39905 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GDNFP39905 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
GDNFP39905 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
GDNFP39905 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.24□□□□□ -1.73
GDNFP39905 AC007685.1-201ENST00000329806 452 ntBASIC4.24□□□□□ -1.73
GDNFP39905 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
GDNFP39905 MIR600-201ENST00000385007 98 ntBASIC4.24□□□□□ -1.73
GDNFP39905 RPS29P13-201ENST00000402041 169 ntBASIC4.24□□□□□ -1.73
GDNFP39905 MIR1182-201ENST00000408363 97 ntBASIC4.24□□□□□ -1.73
GDNFP39905 RNU2-20P-201ENST00000410425 191 ntBASIC4.24□□□□□ -1.73
GDNFP39905 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.24□□□□□ -1.73
GDNFP39905 COX6CP10-201ENST00000416832 224 ntBASIC4.24□□□□□ -1.73
GDNFP39905 AC008065.1-201ENST00000428525 348 ntBASIC4.24□□□□□ -1.73
GDNFP39905 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.24□□□□□ -1.73
GDNFP39905 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
GDNFP39905 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms