Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF11AQ9Y6Q6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AC104076.2-201ENST00000448912 469 ntBASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CA15P1-201ENST00000481698 905 ntBASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AL138966.2-201ENST00000621997 464 ntBASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11AQ9Y6Q6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 KRT8P45-201ENST00000414328 1447 ntBASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AC006011.2-201ENST00000621313 1158 ntBASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AC116562.4-202ENST00000641738 218 ntBASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11AQ9Y6Q6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 GPAT2P1-201ENST00000444924 1672 ntBASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11AQ9Y6Q6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.33■■□□□ 1.32
TNFRSF11AQ9Y6Q6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TNFRSF11AQ9Y6Q6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TNFRSF11AQ9Y6Q6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TNFRSF11AQ9Y6Q6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TNFRSF11AQ9Y6Q6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.32■■□□□ 1.32
TNFRSF11AQ9Y6Q6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11AQ9Y6Q6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms