Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.83■□□□□ 0.45
PCDHGA9Q9Y5G4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA9Q9Y5G4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA9Q9Y5G4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 PCED1CP-201ENST00000419887 785 ntBASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 KRT18P56-201ENST00000507275 550 ntBASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 FAM86EP-206ENST00000510506 987 ntBASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 AC098818.2-201ENST00000564925 2320 ntBASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA9Q9Y5G4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 AP001271.2-201ENST00000624018 1556 ntBASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGA9Q9Y5G4 AC140113.3-201ENST00000605663 199 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms