Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGB3Q9Y5G1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB3Q9Y5G1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB3Q9Y5G1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGB3Q9Y5G1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGB3Q9Y5G1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB3Q9Y5G1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
PCDHGB3Q9Y5G1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB3Q9Y5G1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGB3Q9Y5G1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 KRT18P16-201ENST00000510337 1294 ntBASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHGB3Q9Y5G1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 AC233263.1-201ENST00000578059 224 ntBASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGB3Q9Y5G1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 ZNF815P-204ENST00000434898 1737 ntBASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms