Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 KRT18P35-201ENST00000510488 1269 ntBASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 ARMC10P1-201ENST00000313754 855 ntBASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 AK4P3-201ENST00000418260 669 ntBASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 AC141257.4-201ENST00000634557 245 ntBASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 AC136944.6-201ENST00000634818 245 ntBASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00588Q9Y4M8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 AL158211.5-201ENST00000623583 2518 ntBASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 AC117947.1-201ENST00000427448 529 ntBASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 COX11P1-201ENST00000489116 835 ntBASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC00588Q9Y4M8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms