Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC141586.3-201ENST00000562166 1838 ntBASIC20.17■□□□□ 0.82
CDH9Q9ULB4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 AL512604.3-201ENST00000569583 964 ntBASIC20.16■□□□□ 0.82
CDH9Q9ULB4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.16■□□□□ 0.82
CDH9Q9ULB4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDH9Q9ULB4 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.16■□□□□ 0.82
CDH9Q9ULB4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 AL032819.2-201ENST00000624543 2162 ntBASIC20.15■□□□□ 0.82
CDH9Q9ULB4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 FEM1AP3-201ENST00000403722 1741 ntBASIC20.15■□□□□ 0.82
CDH9Q9ULB4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH9Q9ULB4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
CDH9Q9ULB4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.14■□□□□ 0.82
CDH9Q9ULB4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CDH9Q9ULB4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDH9Q9ULB4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 KRT8P3-201ENST00000519669 1449 ntBASIC20.14■□□□□ 0.81
CDH9Q9ULB4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 AL138966.2-201ENST00000621997 464 ntBASIC20.14■□□□□ 0.81
CDH9Q9ULB4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH9Q9ULB4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH9Q9ULB4 IRX1P1-201ENST00000438849 1838 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms