Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 LINC01521-201ENST00000504184 1943 ntBASIC23.13■■□□□ 1.29
MKRN1Q9UHC7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MKRN1Q9UHC7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MKRN1Q9UHC7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.13■■□□□ 1.29
MKRN1Q9UHC7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.13■■□□□ 1.29
MKRN1Q9UHC7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
MKRN1Q9UHC7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 LINC01465-201ENST00000408887 1940 ntBASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MKRN1Q9UHC7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 AC079781.3-201ENST00000449110 356 ntBASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 AC092183.1-201ENST00000469884 875 ntBASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MKRN1Q9UHC7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
MKRN1Q9UHC7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 AL160286.2-201ENST00000567150 934 ntBASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 AC117500.6-201ENST00000624871 588 ntBASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.09■■□□□ 1.29
MKRN1Q9UHC7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MKRN1Q9UHC7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MKRN1Q9UHC7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MKRN1Q9UHC7 KRT8P41-201ENST00000533985 1514 ntBASIC23.08■■□□□ 1.29
MKRN1Q9UHC7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.08■■□□□ 1.29
MKRN1Q9UHC7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.08■■□□□ 1.29
MKRN1Q9UHC7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
MKRN1Q9UHC7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MKRN1Q9UHC7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms