Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CYP39A1Q9NYL5 GPAT2P1-201ENST00000444924 1672 ntBASIC21.66■■□□□ 1.06
CYP39A1Q9NYL5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CYP39A1Q9NYL5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CYP39A1Q9NYL5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CYP39A1Q9NYL5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CYP39A1Q9NYL5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.64■■□□□ 1.06
CYP39A1Q9NYL5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.64■■□□□ 1.06
CYP39A1Q9NYL5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.64■■□□□ 1.06
CYP39A1Q9NYL5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CYP39A1Q9NYL5 AC125437.2-201ENST00000625180 2167 ntBASIC21.64■■□□□ 1.06
CYP39A1Q9NYL5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CYP39A1Q9NYL5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.64■■□□□ 1.06
CYP39A1Q9NYL5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 STARP1-201ENST00000397973 869 ntBASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CYP39A1Q9NYL5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 AC005332.1-201ENST00000577698 1310 ntBASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 AC112907.2-201ENST00000448639 330 ntBASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 HYMAI.1-201ENST00000620949 238 ntBASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CYP39A1Q9NYL5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CYP39A1Q9NYL5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 IER3-202ENST00000376377 1350 ntBASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 AL023284.2-201ENST00000405850 579 ntBASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 SPDYE15P-201ENST00000424157 909 ntBASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CYP39A1Q9NYL5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms