Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AC022919.1-201ENST00000624979 626 ntBASIC21.88■■□□□ 1.09
RNF216Q9NWF9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 MIR2861-201ENST00000636310 90 ntBASIC21.88■■□□□ 1.09
RNF216Q9NWF9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF216Q9NWF9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 HLA-G-202ENST00000376815 851 ntBASIC21.87■■□□□ 1.09
RNF216Q9NWF9 HLA-G-203ENST00000376818 1127 ntBASIC21.87■■□□□ 1.09
RNF216Q9NWF9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 AC113410.3-201ENST00000623366 203 ntBASIC21.87■■□□□ 1.09
RNF216Q9NWF9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RNF216Q9NWF9 AL512408.1-201ENST00000569378 2000 ntBASIC21.87■■□□□ 1.09
RNF216Q9NWF9 AL020996.1-203ENST00000536896 2307 ntBASIC21.86■■□□□ 1.09
RNF216Q9NWF9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 BCAS2P3-201ENST00000416374 767 ntBASIC21.86■■□□□ 1.09
RNF216Q9NWF9 FAM210CP-201ENST00000445714 574 ntBASIC21.86■■□□□ 1.09
RNF216Q9NWF9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 AC004264.1-201ENST00000608354 794 ntBASIC21.86■■□□□ 1.09
RNF216Q9NWF9 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF216Q9NWF9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 AL035563.1-201ENST00000609087 1539 ntBASIC21.85■■□□□ 1.09
RNF216Q9NWF9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 RNU4-40P-201ENST00000364351 143 ntBASIC21.85■■□□□ 1.09
RNF216Q9NWF9 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 AL157385.1-201ENST00000446973 268 ntBASIC21.85■■□□□ 1.09
RNF216Q9NWF9 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 MTND2P38-201ENST00000522536 667 ntBASIC21.85■■□□□ 1.09
RNF216Q9NWF9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF216Q9NWF9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms