Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CDC42SE2Q9NRR3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CDC42SE2Q9NRR3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.15□□□□□ -0.31
CDC42SE2Q9NRR3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 AC091874.3-201ENST00000512672 1195 ntBASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDC42SE2Q9NRR3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 LETM1P2-201ENST00000597330 2178 ntBASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 AC092368.3-202ENST00000574180 1591 ntBASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 MIR663A-201ENST00000385250 93 ntBASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 AC083906.6-201ENST00000641366 219 ntBASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 ANO7L1-203ENST00000602586 1720 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms