Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 YBX1P10-201ENST00000444752 975 ntBASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 MTDHP1-201ENST00000605323 784 ntBASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 POU5F1P3-201ENST00000428824 1078 ntBASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 AC073648.6-201ENST00000641589 218 ntBASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.73■□□□□ 0.43
CTPS2Q9NRF8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 KRT8P8-201ENST00000434750 1448 ntBASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 CROCCP3-202ENST00000420820 1947 ntBASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 AC104581.1-202ENST00000635932 2618 ntBASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTPS2Q9NRF8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms