Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.39■■□□□ 1.01
PDLIM7Q9NR12 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 FDX1P1-201ENST00000449115 551 ntBASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 AFG3L1P-217ENST00000557444 2447 ntBASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 LINC01311-201ENST00000565162 1445 ntBASIC21.38■■□□□ 1.01
PDLIM7Q9NR12 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 STARP1-201ENST00000397973 869 ntBASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 AP000523.1-201ENST00000398242 1049 ntBASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 AP000347.1-202ENST00000435868 847 ntBASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 RN7SL510P-201ENST00000581311 263 ntBASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDLIM7Q9NR12 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 AC092119.3-201ENST00000612618 583 ntBASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.36■■□□□ 1.01
PDLIM7Q9NR12 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
PDLIM7Q9NR12 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 SDHAP1-207ENST00000440850 2000 ntBASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 AL158211.5-201ENST00000623583 2518 ntBASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms