Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 ABHD17AP1-201ENST00000358206 933 ntBASIC17.23■□□□□ 0.35
HINT3Q9NQE9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 PNMA6B-201ENST00000538162 1200 ntBASIC17.23■□□□□ 0.35
HINT3Q9NQE9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.23■□□□□ 0.35
HINT3Q9NQE9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 POU5F1P3-201ENST00000428824 1078 ntBASIC17.22■□□□□ 0.35
HINT3Q9NQE9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 AL121906.2-201ENST00000621597 723 ntBASIC17.22■□□□□ 0.35
HINT3Q9NQE9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 AC079598.2-202ENST00000546624 1451 ntBASIC17.22■□□□□ 0.35
HINT3Q9NQE9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 LETM1P2-201ENST00000597330 2178 ntBASIC17.22■□□□□ 0.35
HINT3Q9NQE9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HINT3Q9NQE9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 FEM1AP3-201ENST00000403722 1741 ntBASIC17.21■□□□□ 0.35
HINT3Q9NQE9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 ESRRAP1-201ENST00000400596 1257 ntBASIC17.21■□□□□ 0.35
HINT3Q9NQE9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HINT3Q9NQE9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
HINT3Q9NQE9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HINT3Q9NQE9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
HINT3Q9NQE9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 AC018470.1-201ENST00000624790 3129 ntBASIC17.2■□□□□ 0.34
HINT3Q9NQE9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.2■□□□□ 0.34
HINT3Q9NQE9 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.2■□□□□ 0.34
HINT3Q9NQE9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms