Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.77■□□□□ 0.43
CHD8Q9HCK8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHD8Q9HCK8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHD8Q9HCK8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CHD8Q9HCK8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 AL096865.1-201ENST00000606796 927 ntBASIC17.76■□□□□ 0.43
CHD8Q9HCK8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 VENTXP7-201ENST00000475503 772 ntBASIC17.76■□□□□ 0.43
CHD8Q9HCK8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 MIR3917-201ENST00000580971 93 ntBASIC17.76■□□□□ 0.43
CHD8Q9HCK8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHD8Q9HCK8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 AC023274.1-201ENST00000418278 595 ntBASIC17.75■□□□□ 0.43
CHD8Q9HCK8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 AL592071.1-201ENST00000611956 408 ntBASIC17.75■□□□□ 0.43
CHD8Q9HCK8 MIR1199-201ENST00000621445 119 ntBASIC17.75■□□□□ 0.43
CHD8Q9HCK8 AL355877.3-201ENST00000622820 899 ntBASIC17.75■□□□□ 0.43
CHD8Q9HCK8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 PHGDH-210ENST00000641115 1638 ntBASIC17.75■□□□□ 0.43
CHD8Q9HCK8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 HLA-V-201ENST00000429037 534 ntBASIC17.75■□□□□ 0.43
CHD8Q9HCK8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CHD8Q9HCK8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 AC007274.1-201ENST00000439805 662 ntBASIC17.74■□□□□ 0.43
CHD8Q9HCK8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 AC002347.1-201ENST00000569543 541 ntBASIC17.74■□□□□ 0.43
CHD8Q9HCK8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.74■□□□□ 0.43
CHD8Q9HCK8 NUS1P2-201ENST00000417358 873 ntBASIC17.74■□□□□ 0.43
CHD8Q9HCK8 RPS2P1-201ENST00000434010 821 ntBASIC17.74■□□□□ 0.43
CHD8Q9HCK8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 AL591684.3-201ENST00000605187 298 ntBASIC17.74■□□□□ 0.43
CHD8Q9HCK8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHD8Q9HCK8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 KRT18P23-201ENST00000435622 1283 ntBASIC17.73■□□□□ 0.43
CHD8Q9HCK8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms