Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP4BQ9H444 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 AC004951.3-201ENST00000418645 1148 ntBASIC24.04■■□□□ 1.44
CHMP4BQ9H444 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP4BQ9H444 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP4BQ9H444 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 UBE2SP1-201ENST00000450587 669 ntBASIC24.02■■□□□ 1.44
CHMP4BQ9H444 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 AC142381.4-202ENST00000563973 229 ntBASIC24.02■■□□□ 1.44
CHMP4BQ9H444 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 CR392000.1-201ENST00000624770 1228 ntBASIC24.02■■□□□ 1.44
CHMP4BQ9H444 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 AC093525.10-201ENST00000625130 1569 ntBASIC24.02■■□□□ 1.44
CHMP4BQ9H444 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CHMP4BQ9H444 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms