Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 AL355075.4-201ENST00000554988 638 ntBASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 CKBP1-201ENST00000565489 1086 ntBASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TMEM60Q9H2L4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 AC006333.2-201ENST00000607957 2099 ntBASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 RBM17P1-201ENST00000453646 1190 ntBASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 MIR4785-201ENST00000585005 73 ntBASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 AC079598.2-202ENST00000546624 1451 ntBASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
TMEM60Q9H2L4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 PRSS44-201ENST00000515154 1146 ntBASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.55■■□□□ 1.04
TMEM60Q9H2L4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM60Q9H2L4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.53■■□□□ 1.04
TMEM60Q9H2L4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TMEM60Q9H2L4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM60Q9H2L4 TNXA-203ENST00000507684 2038 ntBASIC21.53■■□□□ 1.04
TMEM60Q9H2L4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM60Q9H2L4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TMEM60Q9H2L4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.53■■□□□ 1.04
TMEM60Q9H2L4 AC096733.2-201ENST00000609937 1394 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms