Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 FZD10-202ENST00000539839 3282 ntBASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 AL390719.1-204ENST00000412397 1219 ntBASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 AC004911.1-201ENST00000416316 871 ntBASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 ARL4AP4-201ENST00000434170 518 ntBASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 AC133552.2-202ENST00000575694 574 ntBASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 AC008764.6-201ENST00000595909 2069 ntBASIC9.67□□□□□ -0.86
KRTAP3-1Q9BYR8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 AP006587.1-201ENST00000534129 1502 ntBASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 AC020916.1-201ENST00000587762 1774 ntBASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 RER1-204ENST00000378518 522 ntTSL 3 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 YBX1P10-201ENST00000444752 975 ntBASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC9.66□□□□□ -0.86
KRTAP3-1Q9BYR8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms