Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 TSPY21P-201ENST00000433481 731 ntBASIC19.91■□□□□ 0.78
LRRC3Q9BY71 AL671277.2-201ENST00000458060 996 ntBASIC19.91■□□□□ 0.78
LRRC3Q9BY71 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 PCED1CP-201ENST00000419887 785 ntBASIC19.9■□□□□ 0.78
LRRC3Q9BY71 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 GCSHP2-201ENST00000560971 527 ntBASIC19.9■□□□□ 0.78
LRRC3Q9BY71 HYMAI.1-201ENST00000620949 238 ntBASIC19.9■□□□□ 0.78
LRRC3Q9BY71 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 CR769767.2-201ENST00000622735 460 ntBASIC19.9■□□□□ 0.78
LRRC3Q9BY71 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC3Q9BY71 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LRRC3Q9BY71 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
LRRC3Q9BY71 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
LRRC3Q9BY71 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC3Q9BY71 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 AP000523.1-201ENST00000398242 1049 ntBASIC19.88■□□□□ 0.77
LRRC3Q9BY71 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.88■□□□□ 0.77
LRRC3Q9BY71 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC3Q9BY71 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms