Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 AC004911.1-201ENST00000416316 871 ntBASIC17.5■□□□□ 0.39
COPS4Q9BT78 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COPS4Q9BT78 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.5■□□□□ 0.39
COPS4Q9BT78 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COPS4Q9BT78 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COPS4Q9BT78 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COPS4Q9BT78 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 AC093787.1-201ENST00000450396 207 ntBASIC17.48■□□□□ 0.39
COPS4Q9BT78 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.48■□□□□ 0.39
COPS4Q9BT78 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms