Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE1Q99829 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE1Q99829 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE1Q99829 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CPNE1Q99829 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE1Q99829 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.08■□□□□ 0.64
CPNE1Q99829 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CPNE1Q99829 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CPNE1Q99829 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CPNE1Q99829 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CPNE1Q99829 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.07■□□□□ 0.64
CPNE1Q99829 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CPNE1Q99829 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.07■□□□□ 0.64
CPNE1Q99829 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.07■□□□□ 0.64
CPNE1Q99829 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.07■□□□□ 0.64
CPNE1Q99829 C1QL1P1-201ENST00000568105 661 ntBASIC19.07■□□□□ 0.64
CPNE1Q99829 AC104771.1-201ENST00000603335 964 ntBASIC19.07■□□□□ 0.64
CPNE1Q99829 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CPNE1Q99829 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.07■□□□□ 0.64
CPNE1Q99829 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CPNE1Q99829 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.07■□□□□ 0.64
CPNE1Q99829 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CPNE1Q99829 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE1Q99829 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CPNE1Q99829 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CPNE1Q99829 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.06■□□□□ 0.64
CPNE1Q99829 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CPNE1Q99829 NBPF21P-201ENST00000425093 1451 ntBASIC19.06■□□□□ 0.64
CPNE1Q99829 AC079598.2-202ENST00000546624 1451 ntBASIC19.06■□□□□ 0.64
CPNE1Q99829 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.06■□□□□ 0.64
CPNE1Q99829 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.06■□□□□ 0.64
CPNE1Q99829 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 UNC93B5-201ENST00000530315 699 ntBASIC19.06■□□□□ 0.64
CPNE1Q99829 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CPNE1Q99829 HLA-A-209ENST00000638375 975 ntBASIC19.06■□□□□ 0.64
CPNE1Q99829 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE1Q99829 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE1Q99829 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CPNE1Q99829 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE1Q99829 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.05■□□□□ 0.64
CPNE1Q99829 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.05■□□□□ 0.64
CPNE1Q99829 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.05■□□□□ 0.64
CPNE1Q99829 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.05■□□□□ 0.64
CPNE1Q99829 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE1Q99829 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE1Q99829 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.05■□□□□ 0.64
CPNE1Q99829 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.05■□□□□ 0.64
CPNE1Q99829 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.05■□□□□ 0.64
CPNE1Q99829 AC005082.1-201ENST00000413042 2259 ntBASIC19.05■□□□□ 0.64
CPNE1Q99829 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE1Q99829 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CPNE1Q99829 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE1Q99829 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE1Q99829 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE1Q99829 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.05■□□□□ 0.64
CPNE1Q99829 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE1Q99829 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.04■□□□□ 0.64
CPNE1Q99829 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE1Q99829 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE1Q99829 ANO7L1-203ENST00000602586 1720 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms