Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 CCR12P-201ENST00000446203 998 ntBASIC21.23■□□□□ 0.99
SCLT1Q96NL6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 AC116562.4-202ENST00000641738 218 ntBASIC21.23■□□□□ 0.99
SCLT1Q96NL6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SCLT1Q96NL6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 AL049597.2-201ENST00000565575 961 ntBASIC21.22■□□□□ 0.99
SCLT1Q96NL6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SCLT1Q96NL6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SCLT1Q96NL6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.2■□□□□ 0.99
SCLT1Q96NL6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 INGX-201ENST00000359239 846 ntBASIC21.2■□□□□ 0.98
SCLT1Q96NL6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 AC010203.1-204ENST00000548782 407 ntBASIC21.2■□□□□ 0.98
SCLT1Q96NL6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SCLT1Q96NL6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SCLT1Q96NL6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCLT1Q96NL6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms