Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SUSD3Q96L08 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SUSD3Q96L08 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
SUSD3Q96L08 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.23■□□□□ 0.83
SUSD3Q96L08 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SUSD3Q96L08 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
SUSD3Q96L08 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SUSD3Q96L08 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SUSD3Q96L08 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 GPAT2P1-201ENST00000444924 1672 ntBASIC20.22■□□□□ 0.83
SUSD3Q96L08 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUSD3Q96L08 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUSD3Q96L08 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SUSD3Q96L08 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUSD3Q96L08 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUSD3Q96L08 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SUSD3Q96L08 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SUSD3Q96L08 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SUSD3Q96L08 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SUSD3Q96L08 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 AL158211.5-201ENST00000623583 2518 ntBASIC20.21■□□□□ 0.83
SUSD3Q96L08 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 AL023284.2-201ENST00000405850 579 ntBASIC20.21■□□□□ 0.83
SUSD3Q96L08 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.21■□□□□ 0.83
SUSD3Q96L08 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.21■□□□□ 0.83
SUSD3Q96L08 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.21■□□□□ 0.83
SUSD3Q96L08 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.21■□□□□ 0.83
SUSD3Q96L08 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SUSD3Q96L08 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SUSD3Q96L08 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SUSD3Q96L08 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SUSD3Q96L08 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 AL031133.1-201ENST00000406807 723 ntBASIC20.2■□□□□ 0.82
SUSD3Q96L08 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SUSD3Q96L08 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SUSD3Q96L08 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.19■□□□□ 0.82
SUSD3Q96L08 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.19■□□□□ 0.82
SUSD3Q96L08 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.19■□□□□ 0.82
SUSD3Q96L08 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SUSD3Q96L08 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SUSD3Q96L08 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SUSD3Q96L08 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms