Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 HLA-G-202ENST00000376815 851 ntBASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 HLA-G-203ENST00000376818 1127 ntBASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 BCL2-203ENST00000589955 5011 ntBASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.2■□□□□ 0.66
CHMP6Q96FZ7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 ESPNP-201ENST00000270691 2015 ntBASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 KRT18P61-201ENST00000585825 1298 ntBASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHMP6Q96FZ7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 AC137761.2-201ENST00000561729 223 ntBASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 SLC7A5P1-201ENST00000568957 537 ntBASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 AC145350.3-201ENST00000569033 163 ntBASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHMP6Q96FZ7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP6Q96FZ7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms