Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.41■■□□□ 1.5
SMARCC1Q92922 MIR3917-201ENST00000580971 93 ntBASIC24.41■■□□□ 1.5
SMARCC1Q92922 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.41■■□□□ 1.5
SMARCC1Q92922 AL121772.3-201ENST00000610840 674 ntBASIC24.41■■□□□ 1.5
SMARCC1Q92922 AC112497.1-201ENST00000624824 639 ntBASIC24.41■■□□□ 1.5
SMARCC1Q92922 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SMARCC1Q92922 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC1Q92922 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC1Q92922 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.41■■□□□ 1.5
SMARCC1Q92922 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC1Q92922 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SMARCC1Q92922 AL391807.1-203ENST00000604392 2365 ntBASIC24.4■■□□□ 1.5
SMARCC1Q92922 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC1Q92922 LINC00565-201ENST00000562710 2331 ntBASIC24.4■■□□□ 1.5
SMARCC1Q92922 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC1Q92922 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC1Q92922 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC1Q92922 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC1Q92922 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC24.4■■□□□ 1.5
SMARCC1Q92922 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC1Q92922 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC1Q92922 TPSP2-201ENST00000561760 610 ntBASIC24.4■■□□□ 1.5
SMARCC1Q92922 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC1Q92922 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SMARCC1Q92922 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SMARCC1Q92922 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMARCC1Q92922 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SMARCC1Q92922 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SMARCC1Q92922 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMARCC1Q92922 AL512408.1-201ENST00000569378 2000 ntBASIC24.39■■□□□ 1.5
SMARCC1Q92922 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24.39■■□□□ 1.5
SMARCC1Q92922 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMARCC1Q92922 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.39■■□□□ 1.5
SMARCC1Q92922 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.39■■□□□ 1.5
SMARCC1Q92922 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
SMARCC1Q92922 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMARCC1Q92922 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC24.39■■□□□ 1.49
SMARCC1Q92922 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC24.39■■□□□ 1.49
SMARCC1Q92922 AC009078.2-202ENST00000463353 338 ntBASIC24.39■■□□□ 1.49
SMARCC1Q92922 AC104692.2-201ENST00000603054 253 ntBASIC24.39■■□□□ 1.49
SMARCC1Q92922 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.39■■□□□ 1.49
SMARCC1Q92922 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMARCC1Q92922 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC1Q92922 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC1Q92922 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SMARCC1Q92922 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.38■■□□□ 1.49
SMARCC1Q92922 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.38■■□□□ 1.49
SMARCC1Q92922 AC091304.2-201ENST00000564639 760 ntBASIC24.38■■□□□ 1.49
SMARCC1Q92922 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC1Q92922 AL732292.2-201ENST00000609649 430 ntBASIC24.38■■□□□ 1.49
SMARCC1Q92922 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC1Q92922 AL031008.1-201ENST00000619963 541 ntBASIC24.38■■□□□ 1.49
SMARCC1Q92922 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC1Q92922 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.38■■□□□ 1.49
SMARCC1Q92922 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.38■■□□□ 1.49
SMARCC1Q92922 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SMARCC1Q92922 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC1Q92922 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SMARCC1Q92922 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 AL162377.1-201ENST00000618844 1793 ntBASIC24.37■■□□□ 1.49
SMARCC1Q92922 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 AL160237.2-201ENST00000556165 472 ntBASIC24.37■■□□□ 1.49
SMARCC1Q92922 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 LINC01711-201ENST00000598340 967 ntBASIC24.37■■□□□ 1.49
SMARCC1Q92922 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SMARCC1Q92922 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24.37■■□□□ 1.49
SMARCC1Q92922 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SMARCC1Q92922 KRT8P3-201ENST00000519669 1449 ntBASIC24.36■■□□□ 1.49
SMARCC1Q92922 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC24.36■■□□□ 1.49
SMARCC1Q92922 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SMARCC1Q92922 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SMARCC1Q92922 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms