Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RPGRQ92834 AC099778.1-201ENST00000568593 1911 ntBASIC23.5■■□□□ 1.35
RPGRQ92834 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPGRQ92834 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.5■■□□□ 1.35
RPGRQ92834 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RPGRQ92834 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.5■■□□□ 1.35
RPGRQ92834 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.5■■□□□ 1.35
RPGRQ92834 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPGRQ92834 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPGRQ92834 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.49■■□□□ 1.35
RPGRQ92834 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RPGRQ92834 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPGRQ92834 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPGRQ92834 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
RPGRQ92834 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
RPGRQ92834 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.49■■□□□ 1.35
RPGRQ92834 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RPGRQ92834 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.49■■□□□ 1.35
RPGRQ92834 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.49■■□□□ 1.35
RPGRQ92834 RN7SL510P-201ENST00000581311 263 ntBASIC23.49■■□□□ 1.35
RPGRQ92834 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPGRQ92834 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.49■■□□□ 1.35
RPGRQ92834 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RPGRQ92834 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.48■■□□□ 1.35
RPGRQ92834 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.48■■□□□ 1.35
RPGRQ92834 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RPGRQ92834 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.48■■□□□ 1.35
RPGRQ92834 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
RPGRQ92834 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.48■■□□□ 1.35
RPGRQ92834 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RPGRQ92834 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.48■■□□□ 1.35
RPGRQ92834 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
RPGRQ92834 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.47■■□□□ 1.35
RPGRQ92834 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RPGRQ92834 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RPGRQ92834 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.47■■□□□ 1.35
RPGRQ92834 AC246785.2-201ENST00000432512 513 ntBASIC23.47■■□□□ 1.35
RPGRQ92834 AC111152.3-201ENST00000569699 673 ntBASIC23.47■■□□□ 1.35
RPGRQ92834 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.47■■□□□ 1.35
RPGRQ92834 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.47■■□□□ 1.35
RPGRQ92834 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
RPGRQ92834 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RPGRQ92834 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RPGRQ92834 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPGRQ92834 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.46■■□□□ 1.35
RPGRQ92834 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.46■■□□□ 1.35
RPGRQ92834 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPGRQ92834 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.46■■□□□ 1.35
RPGRQ92834 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.46■■□□□ 1.35
RPGRQ92834 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.46■■□□□ 1.35
RPGRQ92834 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.46■■□□□ 1.35
RPGRQ92834 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.46■■□□□ 1.35
RPGRQ92834 MIR3180-1-201ENST00000580374 94 ntBASIC23.46■■□□□ 1.35
RPGRQ92834 MIR3180-3-201ENST00000584616 94 ntBASIC23.46■■□□□ 1.35
RPGRQ92834 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RPGRQ92834 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.46■■□□□ 1.35
RPGRQ92834 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RPGRQ92834 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPGRQ92834 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.46■■□□□ 1.35
RPGRQ92834 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPGRQ92834 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPGRQ92834 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.46■■□□□ 1.35
RPGRQ92834 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RPGRQ92834 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RPGRQ92834 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
RPGRQ92834 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.35
RPGRQ92834 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.45■■□□□ 1.35
RPGRQ92834 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RPGRQ92834 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RPGRQ92834 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.45■■□□□ 1.34
RPGRQ92834 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.45■■□□□ 1.34
RPGRQ92834 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RPGRQ92834 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RPGRQ92834 SEC1P-202ENST00000473944 940 ntBASIC23.45■■□□□ 1.34
RPGRQ92834 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RPGRQ92834 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.45■■□□□ 1.34
RPGRQ92834 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.45■■□□□ 1.34
RPGRQ92834 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RPGRQ92834 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms