Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF139Q8WU17 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 MFAP1P1-201ENST00000442257 1255 ntBASIC20.03■□□□□ 0.8
RNF139Q8WU17 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 AP005242.2-201ENST00000580065 1175 ntBASIC20.03■□□□□ 0.8
RNF139Q8WU17 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF139Q8WU17 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF139Q8WU17 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF139Q8WU17 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RNF139Q8WU17 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF139Q8WU17 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF139Q8WU17 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF139Q8WU17 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF139Q8WU17 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF139Q8WU17 AC138932.1-201ENST00000534164 6830 ntBASIC20.02■□□□□ 0.79
RNF139Q8WU17 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RNF139Q8WU17 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF139Q8WU17 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF139Q8WU17 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF139Q8WU17 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RNF139Q8WU17 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF139Q8WU17 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF139Q8WU17 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF139Q8WU17 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF139Q8WU17 NAPSB-206ENST00000562112 1266 ntBASIC20.01■□□□□ 0.79
RNF139Q8WU17 AC133561.5-201ENST00000635547 218 ntBASIC20.01■□□□□ 0.79
RNF139Q8WU17 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF139Q8WU17 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF139Q8WU17 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RNF139Q8WU17 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF139Q8WU17 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF139Q8WU17 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF139Q8WU17 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF139Q8WU17 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF139Q8WU17 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF139Q8WU17 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 AC096733.2-201ENST00000609937 1394 ntBASIC20■□□□□ 0.79
RNF139Q8WU17 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20■□□□□ 0.79
RNF139Q8WU17 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20■□□□□ 0.79
RNF139Q8WU17 AC211429.1-201ENST00000415277 523 ntBASIC20■□□□□ 0.79
RNF139Q8WU17 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20■□□□□ 0.79
RNF139Q8WU17 TSPY21P-201ENST00000433481 731 ntBASIC20■□□□□ 0.79
RNF139Q8WU17 PRSS44-201ENST00000515154 1146 ntBASIC20■□□□□ 0.79
RNF139Q8WU17 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20■□□□□ 0.79
RNF139Q8WU17 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 C2orf69P3-201ENST00000565542 1120 ntBASIC20■□□□□ 0.79
RNF139Q8WU17 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF139Q8WU17 KRT8P9-201ENST00000558927 1449 ntBASIC20■□□□□ 0.79
RNF139Q8WU17 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms