Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BEST2Q8NFU1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
BEST2Q8NFU1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
BEST2Q8NFU1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.52■□□□□ 0.87
BEST2Q8NFU1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 LIN28AP1-201ENST00000429574 405 ntBASIC20.51■□□□□ 0.87
BEST2Q8NFU1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BEST2Q8NFU1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 ATP5G1P1-201ENST00000448724 379 ntBASIC20.5■□□□□ 0.87
BEST2Q8NFU1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.5■□□□□ 0.87
BEST2Q8NFU1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.49■□□□□ 0.87
BEST2Q8NFU1 AP003041.3-201ENST00000527151 707 ntBASIC20.49■□□□□ 0.87
BEST2Q8NFU1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 AC093484.2-201ENST00000580996 2166 ntBASIC20.49■□□□□ 0.87
BEST2Q8NFU1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
BEST2Q8NFU1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms