Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 AC141586.3-201ENST00000562166 1838 ntBASIC18.51■□□□□ 0.55
HIPK4Q8NE63 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 HLA-G-202ENST00000376815 851 ntBASIC18.51■□□□□ 0.55
HIPK4Q8NE63 HLA-G-203ENST00000376818 1127 ntBASIC18.51■□□□□ 0.55
HIPK4Q8NE63 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.51■□□□□ 0.55
HIPK4Q8NE63 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HIPK4Q8NE63 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.5■□□□□ 0.55
HIPK4Q8NE63 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK4Q8NE63 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 KRT18P5-201ENST00000436075 1291 ntBASIC18.49■□□□□ 0.55
HIPK4Q8NE63 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 CYP2T3P-201ENST00000601990 817 ntBASIC18.49■□□□□ 0.55
HIPK4Q8NE63 AC069236.1-201ENST00000604339 616 ntBASIC18.49■□□□□ 0.55
HIPK4Q8NE63 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK4Q8NE63 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.48■□□□□ 0.55
HIPK4Q8NE63 CYP2T1P-201ENST00000432607 1285 ntBASIC18.48■□□□□ 0.55
HIPK4Q8NE63 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms