Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 AC004951.3-201ENST00000418645 1148 ntBASIC20.88■□□□□ 0.93
RDH13Q8NBN7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 SNORA78-201ENST00000459373 127 ntBASIC20.88■□□□□ 0.93
RDH13Q8NBN7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RDH13Q8NBN7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 AL355355.2-201ENST00000442321 338 ntBASIC20.87■□□□□ 0.93
RDH13Q8NBN7 AC093827.2-201ENST00000512654 315 ntBASIC20.87■□□□□ 0.93
RDH13Q8NBN7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 MIR6786-201ENST00000616843 113 ntBASIC20.87■□□□□ 0.93
RDH13Q8NBN7 AC011298.2-201ENST00000617989 482 ntBASIC20.87■□□□□ 0.93
RDH13Q8NBN7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.87■□□□□ 0.93
RDH13Q8NBN7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RDH13Q8NBN7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 IRX1P1-201ENST00000438849 1838 ntBASIC20.86■□□□□ 0.93
RDH13Q8NBN7 MESTP1-201ENST00000404287 994 ntBASIC20.86■□□□□ 0.93
RDH13Q8NBN7 TSPY23P-201ENST00000440136 739 ntBASIC20.86■□□□□ 0.93
RDH13Q8NBN7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 B3GAT3P1-201ENST00000471720 806 ntBASIC20.86■□□□□ 0.93
RDH13Q8NBN7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 NUDT16P1-203ENST00000513809 620 ntBASIC20.86■□□□□ 0.93
RDH13Q8NBN7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 AC026471.5-201ENST00000615068 467 ntBASIC20.86■□□□□ 0.93
RDH13Q8NBN7 AC130371.2-201ENST00000619443 611 ntBASIC20.86■□□□□ 0.93
RDH13Q8NBN7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RDH13Q8NBN7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RDH13Q8NBN7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms