Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 CD177P1-201ENST00000606252 935 ntBASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C11orf42Q8N5U0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 FAM197Y1-201ENST00000421178 764 ntBASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 CR392000.1-201ENST00000624770 1228 ntBASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
C11orf42Q8N5U0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 KRT16P1-201ENST00000399124 1418 ntBASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 AC093484.2-201ENST00000580996 2166 ntBASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 AL160286.2-201ENST00000567150 934 ntBASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
C11orf42Q8N5U0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms