Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 KRT17P1-201ENST00000399211 1546 ntBASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 TEX21P-204ENST00000641479 1693 ntBASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DEPDC4Q8N2C3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 AC093525.10-201ENST00000625130 1569 ntBASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DEPDC4Q8N2C3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 AL031598.1-201ENST00000561511 1773 ntBASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 POU5F1P3-201ENST00000428824 1078 ntBASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 AC083880.1-201ENST00000608266 535 ntBASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 WIZP1-201ENST00000531444 2299 ntBASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DEPDC4Q8N2C3 HTR7P1-202ENST00000624664 4411 ntBASIC17.71■□□□□ 0.42
DEPDC4Q8N2C3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DEPDC4Q8N2C3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms