Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC01561Q8N1V8 AL354751.1-201ENST00000412768 1863 ntBASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 AC073592.3-201ENST00000625118 1834 ntBASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC01561Q8N1V8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LINC01561Q8N1V8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01561Q8N1V8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms