Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 TEX21P-204ENST00000641479 1693 ntBASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 AL671883.3-201ENST00000603274 991 ntBASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 MCCD1P1-208ENST00000445732 328 ntBASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 SLC25A6P4-201ENST00000586535 553 ntBASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 KRT8P3-201ENST00000519669 1449 ntBASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL27A1Q8IZC6 KRT18P1-202ENST00000452408 1331 ntBASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 AC004870.1-201ENST00000315132 882 ntBASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 MIR662-201ENST00000384847 95 ntBASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 AC023511.2-201ENST00000618803 211 ntBASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL27A1Q8IZC6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 AC104692.2-201ENST00000603054 253 ntBASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.96■□□□□ 0.47
COL27A1Q8IZC6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COL27A1Q8IZC6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.96■□□□□ 0.46
COL27A1Q8IZC6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COL27A1Q8IZC6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 HOXB1-202ENST00000577092 1414 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms