Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEFF1Q8IYR6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TMEFF1Q8IYR6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEFF1Q8IYR6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEFF1Q8IYR6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEFF1Q8IYR6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEFF1Q8IYR6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEFF1Q8IYR6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEFF1Q8IYR6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 AL645929.1-201ENST00000420084 975 ntBASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEFF1Q8IYR6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 PRELID1P1-202ENST00000567272 903 ntBASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 MIR3652-201ENST00000579335 131 ntBASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEFF1Q8IYR6 AL162377.1-201ENST00000618844 1793 ntBASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 RASA4DP-201ENST00000460726 1199 ntBASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 AC092329.2-201ENST00000598402 547 ntBASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEFF1Q8IYR6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TMEFF1Q8IYR6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEFF1Q8IYR6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEFF1Q8IYR6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEFF1Q8IYR6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEFF1Q8IYR6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEFF1Q8IYR6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEFF1Q8IYR6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEFF1Q8IYR6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEFF1Q8IYR6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms