Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC005363.2-201ENST00000618631 242 ntBASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 AC096733.2-201ENST00000609937 1394 ntBASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 AC128688.1-201ENST00000487626 519 ntBASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM48Q8IWZ4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 KRT8P41-201ENST00000533985 1514 ntBASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 FAM210CP-201ENST00000445714 574 ntBASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 EGLN1P1-201ENST00000531623 762 ntBASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRIM48Q8IWZ4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 AC087289.5-201ENST00000586076 3175 ntBASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 AC104417.2-201ENST00000562989 1793 ntBASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM48Q8IWZ4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 CCR12P-201ENST00000446203 998 ntBASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms