Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CSMD3Q7Z407 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSMD3Q7Z407 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 AKR1C7P-201ENST00000305623 895 ntBASIC13.27□□□□□ -0.29
CSMD3Q7Z407 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.27□□□□□ -0.29
CSMD3Q7Z407 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 AC243591.1-201ENST00000452967 1364 ntBASIC13.27□□□□□ -0.29
CSMD3Q7Z407 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.27□□□□□ -0.29
CSMD3Q7Z407 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 AP005212.1-201ENST00000581547 1997 ntBASIC13.26□□□□□ -0.29
CSMD3Q7Z407 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 AC024243.1-201ENST00000609234 778 ntBASIC13.26□□□□□ -0.29
CSMD3Q7Z407 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 RNF126P1-202ENST00000569893 925 ntBASIC13.26□□□□□ -0.29
CSMD3Q7Z407 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.26□□□□□ -0.29
CSMD3Q7Z407 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 Z83836.1-201ENST00000624605 1642 ntBASIC13.25□□□□□ -0.29
CSMD3Q7Z407 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSMD3Q7Z407 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms