Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 AL355355.2-201ENST00000442321 338 ntBASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHMP1BQ7LBR1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 AC113410.3-201ENST00000623366 203 ntBASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 BX323043.1-201ENST00000641006 1765 ntBASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.58■□□□□ 0.4
CHMP1BQ7LBR1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 TSPY7P-201ENST00000431358 1114 ntBASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 KRT18P16-201ENST00000510337 1294 ntBASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 CD177P1-201ENST00000606252 935 ntBASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP1BQ7LBR1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms