Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.87■□□□□ 0.45
RTL4Q6ZR62 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RTL4Q6ZR62 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 REXO1L10P-201ENST00000615707 1290 ntBASIC17.86■□□□□ 0.45
RTL4Q6ZR62 REXO1L12P-201ENST00000622156 912 ntBASIC17.86■□□□□ 0.45
RTL4Q6ZR62 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RTL4Q6ZR62 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 AC116562.2-201ENST00000507042 360 ntBASIC17.85■□□□□ 0.45
RTL4Q6ZR62 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 Z82202.1-201ENST00000623446 1880 ntBASIC17.85■□□□□ 0.45
RTL4Q6ZR62 HLA-A-209ENST00000638375 975 ntBASIC17.85■□□□□ 0.45
RTL4Q6ZR62 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTL4Q6ZR62 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 FSCN1P1-201ENST00000568912 1481 ntBASIC17.84■□□□□ 0.45
RTL4Q6ZR62 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 UNC93B2-201ENST00000285383 730 ntBASIC17.84■□□□□ 0.45
RTL4Q6ZR62 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RTL4Q6ZR62 AC004980.1-204ENST00000429707 299 ntBASIC17.84■□□□□ 0.45
RTL4Q6ZR62 TSPY15P-201ENST00000457163 923 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms