Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3AQ6IN85 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3AQ6IN85 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3AQ6IN85 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3AQ6IN85 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PPP4R3AQ6IN85 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 TSPY15P-201ENST00000457163 923 ntBASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PPP4R3AQ6IN85 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 AC097488.1-201ENST00000507834 756 ntBASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 AP005242.2-201ENST00000580065 1175 ntBASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPP4R3AQ6IN85 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 FEM1AP3-201ENST00000403722 1741 ntBASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 IRX1P1-201ENST00000438849 1838 ntBASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.66■■□□□ 1.06
PPP4R3AQ6IN85 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 FITM1-202ENST00000559294 800 ntBASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 AP000525.1-201ENST00000608286 694 ntBASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 FP475955.4-201ENST00000623131 1990 ntBASIC21.65■■□□□ 1.06
PPP4R3AQ6IN85 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.64■■□□□ 1.06
PPP4R3AQ6IN85 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms